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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Predator-Prey Interactions: Selective foraging by wolf spiders
    This interactive case study is intended for use in lower-division biology or ecology courses to complement the SimUText (SimBio) chapter entitled Predation, Herbivory and Parasitism.
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    Sequence Similarity in Developmental Biology - A Bioinformatics Exercise Using Myostatin
    This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of...
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    Exploring how climate will impact plant-insect distributions and interactions using open data and informatics
    This teaching module provides an entry point for students to learn about data science, open data repositories (e.g., citizen science data), and species distribution modeling to study the effects of...

    Keywords: modelingcitizen sciencehypothesis testingdata scienceclimate changeR programming languageBiodiversityplant animal interactionsinquiry-based learningspecies distributionseco-informatics

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    The ml4bio Workshop: Machine Learning Literacy for Biologists
    Presentation on machine learning literacy for biologists at the 2019 Great Lakes Bioinformatics Conference

    Keywords: bioinformaticsmachine learning

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    Frayer model growth mindset
    A Frayer model worksheet for the concept of growth mindset.

    Keywords: growth mindsetFrayer model

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    Modification of "Exploring the population dynamics of wintering bald eagles through long-term data" module
    This module is a modification of the Beckstead et al. module in TIEE Volume 7. It includes a meta-cognition based model and self reflection, no statistics, and is organized to be done in 1-2...

    Keywords: Resources @ ESA - TIEEcase studypopulation ecologyendangered speciesconservation biologymigration ecology

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    NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources
    Presentation on NIBLSE incubators at the 2019 Great Lakes Bioinformatics Conference

    Keywords: bioinformaticsNIBLSEBioinformatics Educationincubators

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    QUBES: An education gateway for professional development, OER sharing, and project support
    Poster about QUBES as an education gateway presented at the 2019 ASCN Transforming Institutions

    Keywords: cyberinfrastructureeducation gateway

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    Mentoring Pacific Island Students for Conservation
    This undergraduate internship program focuses on mentoring Pacific Island Students into conservation careers through development of skills, networks and sense of self, while being grounded in...

    Keywords: internshipconservation ecologyplace based learningSelf-Efficacycultural contextExperiential Education

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    NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources
    Presentation given at GLBIO 2019 on NIBLSE Incubators

    Keywords: bioinformaticsNIBLSEincubators

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    Changing Faculty Practice: Promoting the Scholarship of Teaching with Faculty Mentoring Networks
    Poster presented at Transforming STEM Higher Education: Confirming the Authority of Evidence, AAC&U 2018

    Keywords: faculty mentoring networksquantitative literacyCommunities of Practice

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    Species Range Over Space and Time
    In this module, students use data from natural history collections to look at range shifts related to climate variables over different time periods.

    Keywords: data in the classroomdigital resourcesclimate changenatural history collection

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    Exploring Data with BISON
    A module to explore aggregated observation and collection information, through BISON, or Biodiversity Information Serving Our Nation (https://bison.usgs.gov), a tool for visualizing GBIF data.

    Keywords: Querying databasesdata in the classroombiodiversity informaticsnatural history collectionsGBIFBISON

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    Cell Aggregation and Sphere Packing
    This module introduces the calculation of packing density in the context of understanding cell aggregation and arrangement. It is intended for an introductory biology audience.

    Keywords: RatiosGeometryInequalitiesCell StructureCell GrowthCell AggregationSphere Packing

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    Hardy-Weinberg Equilibrium
    This module introduces the Hardy-Weinberg model in the context of understanding the population's genotype and allele frequencies. It is intended for an introductory biology audience.

    Keywords: genotypeallelesGenetics and EvolutionFrequenciesHardy-Weinberg model

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    Interspecific Competition: the Lotka-Volterra Model
    This module introduces the Lotka-Volterra Model in the context of understanding interspecific competition. It is intended for an introductory biology audience.

    Keywords: differential equationsecologyLotka-Volterrainterspecific interactionsstate-space graphs

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    Muscle Contraction
    This module introduces equations around muscle force in the context of understanding the Sliding Filament Model. It is intended for an introductory biology audience.

    Keywords: plottinghyperbolic equationsOpenStaxAnimal Physiology

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    Nastic Movements in Plants
    This module introduces an osmotic model in the context of understanding plants' capability of rapidly adapting to changes in their environment. It is intended for an introductory biology audience.

    Keywords: plant physiologyhyperbolic equationsOpenStaxinterpreting modelsnastic movements

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    Plant Cell Expansion and Plant Hormones
    This module introduces the cell enlargement model in the context of understanding plant hormones' effects. It is intended for an introductory biology audience.

    Keywords: plant physiologyhyperbolic equationsplant hormonescell enlargement

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    Predator-Prey Dynamics: the Lotka-Volterra Model
    This module introduces the Lotka-Volterra model in the context of understanding how predator and prey interact. It is intended for an introductory biology audience.

    Keywords: differential equationsecologypredatory-prey modelLotka-Volterrapredator-prey interactions

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