You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    A Framework for Teaching Modeling to Biologists
    Abstract for presentation at SIAM ED 2016 on modeling

    Keywords: modelingSIAM

    1443

    views

    190

    downloads

    0

    comments

    0

    adaptations

    Differential Gene Expression during Xenopus laevis Development
    In Developmental Biology classes, students are challenged with understanding how differential gene expression guides embryonic development. It can be difficult for students to realize that genes...

    Keywords: gene expressionXenopusearly developmentembryofertilizationin situ hybridization

    1496

    views

    272

    downloads

    0

    comments

    0

    adaptations

    1-014-DrainingContainers
    Given two rectangular circular cylinders of water with the same volume, but different radii, with a small bore hole of same radius on the center of the bottom through which water exits the...

    Keywords: containerstankflowTorricelli's Lawdrainingfixed volume

    217

    views

    105

    downloads

    0

    comments

    0

    adaptations

    1-045-TimeOfDeath-ModelingScenario
    Students are asked to determine the time of death given both environmental temperature situations and two observations of body temperature under several different circumstances.

    Keywords: body masstemperaturedeathNewton's Law of Coolingbody temperature

    292

    views

    166

    downloads

    0

    comments

    0

    adaptations

    5-014-TwoSpringMass-ModelingScenario
    We ask students to build a Free Body Diagram for a vertical two mass situation in which the two masses are held fixed at the tip and at the bottom. The mass holds the springs together at the join...

    Keywords: massspring mass dampersprings

    161

    views

    132

    downloads

    0

    comments

    0

    adaptations

    Value of Mistakes. Making Mistakes Using R
    This module allows students to frame mistakes and frustrations during their first introduction to R in terms of improved learning and growth mindset.

    Keywords: growth mindsetmath attitudesResources @ BIOMAAPmistakesvalue of mistakes

    1180

    views

    621

    downloads

    0

    comments

    0

    adaptations

    A Very Basic Tutorial for Performing Linear Mixed Effects Analyses: Tutorial 2
    The second of two tutorials that introduce you to linear and linear mixed models. This tutorial serves as a quick boot camp to jump-start your own analyses with linear mixed effects models.

    Keywords: statisticsRdata analysisgraphingconceptsstatsregressionmixed modelslinear modelsfixed effectsrandom effectsintroductionResources @ QUBES - Teaching & Referencetechnologytutorial 2boot campbeginner

    2701

    views

    632

    downloads

    0

    comments

    0

    adaptations

    Linear Models and Linear Mixed Effects in R: Tutorial 1
    The first of two tutorials that introduce you to linear and linear mixed models.

    Keywords: statisticsmathematicsRdata analysisconceptsstatsregressionmixed modelslinear modelsfixed effectsResources @ QUBES - Teaching & Reference

    1564

    views

    295

    downloads

    0

    comments

    0

    adaptations

    Using Immunocytochemistry and Fluorescence Microscopy Imaging to Explore the Mechanism of Action of Anti-Cancer Drugs on the Cell Cycle
    Understanding and visualizing the cell cycle and mitosis is an essential concept of cell biology. This multi-week lab module has students investigate the mechanism of action of anti-cancer drugs...

    Keywords: fluorescence microscopymitosisCell StructureCell ImagingImmunocytochemistryQuantitative microscopySTEM skills

    1850

    views

    491

    downloads

    0

    comments

    0

    adaptations

    Using Student Perceptions and Cooperative Learning to Unpack Primary Literature on Global Change
    This case describes a three-part assignment in which students discuss key processes that regulate the stability and resilience of the Earth system and our increased risk of generating large-scale...

    Keywords: global changeAnthropoceneEarth-systemplanetary boundary conceptthresholds

    1243

    views

    431

    downloads

    0

    comments

    0

    adaptations

    2015-Doust-Saraj-The logistic modeling population having harvesting factor
    The present paper deals with the logistic equation having harvesting factor, which is studied in two cases constant and non-constant.

    Keywords: logisticharvestharvesting factor

    110

    views

    69

    downloads

    0

    comments

    0

    adaptations

    1-010-AtmosphericCO2Bifurcation-TechniqueNarrative
    Students are introduced to the concept of a bifurcation in a first-order ordinary differential equation (ODE) through a modeling scenario involving atmospheric carbon dioxide whish is taken as a...

    Keywords: carbon dioxideSurface Atmosphere Exchangebifurcationfold bifurcationsaddle node

    421

    views

    235

    downloads

    0

    comments

    0

    adaptations

    Regulation Across Scales: Data Points on How Life Works
    We examined the scientific literature for simple, data-based illustrations of double-negative logic in the regulation of biological systems as described by Sean B. Carroll in his text, The...
    742

    views

    224

    downloads

    0

    comments

    1

    adaptations

    A Short Laboratory Module to Help Infuse Metacognition during an Introductory Course-based Research Experience
    A core competency identified in Vision and Change for undergraduate biology students is the Ability to Apply the Process of Science. Here, we describe a three-week laboratory module for students in...

    Keywords: metacognitiongene expressionScientific ProcessExperimenal DesignHypothesis Generationmodel organisms

    1812

    views

    430

    downloads

    0

    comments

    0

    adaptations

    Training future faculty in 30 minutes a week: A modular framework to provide just-in-time professional development to graduate teaching assistants
    Despite increasing recognition of the need to train the teaching assistants (TAs) teaching the majority of STEM lab sections, very few programs report offering sustained teaching professional...

    Keywords: professional developmentTA TrainingTeaching Assistants

    1253

    views

    194

    downloads

    0

    comments

    0

    adaptations

    Measuring Size and Area of Digitized Specimens using ImageJ
    Use ImageJ to analyze morphological characters in digital images of natural history specimens. Skills are transferable to many organisms and other morphological measurements.

    Keywords: ImageJnatural history collectionscourse-based research experiences (CUREs)digitized natural history collections

    1246

    views

    1973

    downloads

    0

    comments

    0

    adaptations

    5-030-AirshedSulphur-ModelingScenario
    Temperature inversions and low wind speeds trap air pollutants in a mountain valley for a period of time. Gaseous sulfur compounds are a significant air pollution problem. We offer a model for...

    Keywords: sulphurpollutionairshedhydrogen sulfidesulfur dioxide

    202

    views

    87

    downloads

    0

    comments

    0

    adaptations

    7-008-MachineReplacement-ModelingScenario
    Students build an integro-differential equation model using a convolution for machine replacement strategies for two different machine failure models.

    Keywords: Probabilityreplacement numberLaplace transformindustrial engineeringmachineconvolutiondistributiojstep functionderivative definition

    293

    views

    135

    downloads

    0

    comments

    0

    adaptations

    2018-Adeniji-EtAl-InverseProblemHolling-TannerModel
    We consider the inverse problem of parameter identification of nonlinear system of ODEs for a specific case of complete information about solution of the Holling-Tanner model for finite number of...

    Keywords: goal functionabsolute error curvesinvers methodholling-Tanner model

    118

    views

    52

    downloads

    0

    comments

    0

    adaptations

    Applying UDL to Existing Materials
    This activity supports instructors in revising materials to incorporate Universal Design for Learning checkpoints.
    781

    views

    224

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search