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  1. Faculty Mentoring Networks: A model for professional development in undergraduate quantitative biology education

    17 Nov 2016 | Contributor(s): Alison N Hale, Arietta Fleming-Davies, Gabriela Hamerlinck, Melissa Aikens, Sam S Donovan, Kristin Jenkins, Jeremy M Wojdak

    This resource has been updated - find the current version here: https://qubeshub.org/publications/208There is a significant need to design and test alternative models for faculty development around undergraduate science teaching. Existing models for helping faculty adopt evidence-based...

  2. Faculty Mentoring Networks: A Model for Promoting Teaching Scholarship in Quantitative Biology Education

    06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Alison N Hale, Arietta Fleming-Davies, Gabriela Hamerlinck, Jeremy M Wojdak, Kristin Jenkins

    This resource has been updated - find the current version here: https://qubeshub.org/publications/205/Faculty Mentoring Networks (FMNs) are designed to support the development of teaching scholarship by promoting teacher identity, self-efficacy, and knowledge/experience via four core design...

  3. HHMI Teacher Guide: Math and Statistics

    23 Sep 2015 | Teaching & Reference Material | Contributor(s): Paul Strode, Ann Brokaw

    This resource has been updated - find the current version here: https://qubeshub.org/publications/342Topics include measures of average (mean, median, and mode), variability (range and standard deviation), uncertainty (standard error and 95% confidence interval), Chi-square analysis, student...

  4. Human Genetic Variation: A Flipped Exercise in Cultural Competency

    15 Jan 2015 | Teaching & Reference Material | Contributor(s): Shoumita Dasgupta, Katherine Larabee Tuttle

    "This interactive case discussion was created to emphasize the clinical relevance of population genetics, but is also a suitable resource for teaching the basic principles of population genetics while relating them to human genetic variation. Our understanding of human genetic variation has...

  5. Human Genetic Variation: A Flipped Exercise in Cultural Competency

    15 Jan 2015 | Teaching & Reference Material | Contributor(s): Shoumita Dasgupta, Katherine Larabee Tuttle

    "This interactive case discussion was created to emphasize the clinical relevance of population genetics, but is also a suitable resource for teaching the basic principles of population genetics while relating them to human genetic variation. Our understanding of human genetic variation has...

  6. IMMERSION Video

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Alondra Torres-Navarro

  7. IPMpack: an R package for Integral Projection Models

    19 Jan 2015 | Software (Off-site) | Contributor(s): C. Jessica E. Metcalf, Sean M. McMahon, Roberto Salguero-Gómez, Eelke Jongejans, Cory Merow

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/779IPMpack is an R package (R Development Core Team 2013) that allows users to build and analyse Integral Projection Models. An IPM is a demographic tool to explore the...

  8. Java Applets for Power and Sample Size

    10 Mar 2015 | Software (Off-site) | Contributor(s): Russell Lenth

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/899From the website:This software is intended to be useful in planning statistical studies.  It is not intended to be used for analysis of data that have already been...

  9. Joel E. Greengiant Learns About Peas: From Nucleotides to Selection

    17 Jun 2015 | Teaching & Reference Material | Contributor(s): Merle Heidemann, Peter J.T. White, Jim Smith

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/845This case study follows purveyors of peas, Joel E. and Jolene Greengiant, as they learn about the origin, biochemistry, genetics and eventual artificial selection of sweet...

  10. Linear models and linear mixed effects models in R: Tutorial 1

    24 Apr 2015 | Teaching & Reference Material | Contributor(s): Bodo Winter

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/832Linear models and linear mixed models are an impressively powerful and flexible tool for understanding the world. This tutorial is the first of two tutorials that introduce...

  11. Linked Genes and Recombination: Advanced Punnett Squares

    12 Jan 2015 | Teaching & Reference Material | Contributor(s): Dr. Kaci Thompson, Dr. Karen Nelson

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/743An online module in which students learn about more difficult genetics problems, including linked genes and crossing over. Quantitatively students learn about marginal...

  12. MathBench Biology Modules

    13 Mar 2015 | Teaching & Reference Material | Contributor(s): Katerina V. Thompson, Kären C. Nelson, Gili Marbach-Ad, Michael Keller, William F. Fagan, Patricia A. Shields

    Modules designed to help students understand the math behind the material learned in introductory ecology courses. 

  13. Measuring the Health of the Earth Using the Theory of Island Biography

    11 Mar 2015 | Teaching & Reference Material | Contributor(s): Jana Eggleston, Stephanie Renee Campau, Farshid Ahrestani, Holly D Gaff

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/868Biodiversity has been shown to be a good measure of the health of the planet system (McGrady-Steed et al. 1997). The more species and genetic diversity, the more stable the...

  14. Mendelian Genetics, Probability, Pedigree, and Chi-Squared Statistics

    03 Oct 2015 | Teaching & Reference Material | Contributor(s): Anne Brokaw, Michelle Garber-Talamo

    This resource has been updated - find the current version here: https://qubeshub.org/publications/341In this classroom activity, students are introduced to the genetics of sickle cell disease by a short film The Making of the Fittest: Natural Selection in Humans . A classroom handout...

  15. Mendelian Genetics, Probability, Pedigree, and Chi-Squared Statistics

    03 Oct 2015 | Teaching & Reference Material | Contributor(s): Anne Brokaw, Michelle Garber-Talamo

    This resource has been updated - find the current version here: https://qubeshub.org/publications/341In this classroom activity, students are introduced to the genetics of sickle cell disease by a short film The Making of the Fittest: Natural Selection in Humans . A classroom handout...

  16. Modeling Infectious Disease through Contact Networks

    25 Mar 2015 | Teaching & Reference Material | Contributor(s): Todd Graham, Claire Seibold, Rebecca Driessen, Hannah Lea Callender

    This poster was presented at the University of Portland's Summer Research Symposium on November 9, 2014, in Portland, Oregon. The poster is aimed at readers with little or no background in modeling infectious diseases. The contents provide a brief overview of modeling infectious diseases on...

  17. ModelSim Population Biology Unit

    18 May 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/902This resource provides rich student modeling activities and materials, teacher resources, and much more, in the realm of agent based models applied to population biology....

  18. Modernizing Statistics Education via Biology Applications

    21 Oct 2015 | Teaching & Reference Material | Contributor(s): Olcay Akman

    This resource has been updated - find the current version here: https://qubeshub.org/publications/254In most traditional statistics courses, instructors use data from different fields in an effort to give the courses an interdisciplinary flavor. They generally fail because these attempts...

  19. Monkey Opsins

    20 Aug 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/356Humans have trichromatic vision. Our eyes detect colors in the visible range of the spectrum using three different cone cell types, each maximally stimulated by a different wavelength of...

  20. More Mice with Fangs: Intermediate Punnett Squares

    09 Jan 2015 | Teaching & Reference Material | Contributor(s): Dr. Kaci Thompson, Dr. Kären Nelson

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/742An online module utilizing probability and Punnett squares to introduce students to more complex genetic problems. The module emphasizes students' use of probability...