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  1. Biometeorology of Asthma in South Florida: From Statistical Analysis to Mathematical Modeling

    21 Oct 2015 | Contributor(s): David Quesada

    This resource has been updated - find the current version here: https://qubeshub.org/publications/251Biometeorology has emerged as an interdisciplinary field dedicated to the study of the mutual influence between living things and the surrounding environment. Within this field, the study of...

  2. BioNumbers—the database of key numbers in molecular and cell biology

    03 Oct 2015 | Teaching & Reference Material | Contributor(s): Ron Milo, Paul Jorgensen, Uri Moran, Griffin Weber, Michael Springer

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/821BioNumbers (http://www.bionumbers.hms.harvard.edu) is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of...

  3. BIOQuest Summer Workshop 2016 – Bissell talk notes

    23 Jun 2016 | Teaching & Reference Material | Contributor(s): Ahrash Bissell

    This resource has been updated - find the current version here: https://qubeshub.org/publications/325Session title:Distributed creation, community guidance, and OER development: current models and emerging practicesSession description:Open educational resources (OER) encompass teaching,...

  4. BioQUEST: Visual Datasets

    13 Mar 2015 | Teaching & Reference Material | Contributor(s): Ethel Stanley

    This resource has been updated - find the current version here: https://qubeshub.org/publications/345This downloadable module features imaginary animals and plants, and is meant to aid students in thinking about questions of evolution, classification, and phylogeny. 

  5. Brainstorming ideas

    24 Jan 2015 | Teaching & Reference Material | Contributor(s): Lisa Limeri, Sam S Donovan, Tim Mackie, Lauren Bakale, Amanda Riley, Gabriel da Silva Pescador

    A list of ideas we brainstormed in class on 22-Jan-2015 for our group project with Unity.

  6. Breeding synchrony in colonial birds: from local stress to global harmony

    02 Aug 2015 | Teaching & Reference Material | Contributor(s): Roger Jovani, Volker Grimm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/871This is a supplemental resource for Agent-based and Individual-based Modeling: a practical introduction by Railsback and Grimm (2012). This is a reprint from...

  7. Bringing Real Ecological Data into the Classroom: DryadLab on QUBESHub

    09 Dec 2016 | Teaching & Reference Material | Contributor(s): Gabriela Hamerlinck, Kristin Jenkins

    This resource has been updated - find the current version here: https://qubeshub.org/publications/207Bringing Real Ecological Data into the Classroom: DryadLab on QUBESHub was presented at the annual meeting of the Association of College & University Biology Educators in 2016. 

  8. Building Successful Online Communities: Evidence-Based Social Design

    24 Feb 2015 | Teaching & Reference Material | Contributor(s): Robert E. Kraut, Paul Resnick

    "What does social science tell us about how to make thriving online communities? Quite a lot, it turns out - but only if we listen very closely and, at times, employ a translator." - Kraut and Resnick 2012

  9. Calculus, Zombies, Community, and QUBES

    25 Aug 2015 | Teaching & Reference Material | Contributor(s): Carrie Diaz Eaton

    This resource has been updated - find the current version here: https://qubeshub.org/publications/225At the interface of mathematics and biology emerges not only new research, but also a resurging call for education to meet the demands of this research.  Reports suggest foundational...

  10. Carbon Footprint: A Study of Unit and Dimensions

    11 Mar 2015 | Teaching & Reference Material | Contributor(s): Amanda Bonilla, Laura Foster, Rikki Wagstrom, Jean McGivney-Burelle

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/866In this module, we integrate the context of carbon emission and human consumption into an introductory lesson on units and estimation. Background information is provided to...

  11. CATALST - Change Agents for Teaching and Learning Statistics

    22 Jan 2015 | Teaching & Reference Material | Contributor(s): Joan Garfield, Robert delMas, Andrew Zieffler, Allan Rossman, Beth Chance, John Holcomb, George Cobb

    From the project website: "This project uses the acronym CATALST (Change Agents for Teaching and Learning Statistics) to represent the goal of accelerating change in the teaching and learning of statistics. The changes we are working towards are in both content and pedagogy. Our focus is the...

  12. Cell Biology by the Numbers

    21 Jan 2015 | Teaching & Reference Material | Contributor(s): Ron Milo, Rob Phillips

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/819Vignettes that reveal how numbers serve as a sixth sense to understanding our cells.Sample figures:[[Slider(105-f3-ViralMeasuringTape-13.png,...

  13. Ch 11 Genetics and Statistics (Chi Square)

    19 Jan 2015 | Teaching & Reference Material | Contributor(s): Shannan Muskopf

    A PowerPoint slideshow which informs the viewer of  the purposes of chi square.  The PowerPoint includes  definitions of relevant terms,  step-by-step procedures for calculating chi square, and questions for individual thoughts.  The slides support one example...

  14. Changes in Lake Ice: Ecosystem Response to Global Change

    23 Sep 2015 | Teaching & Reference Material | Contributor(s): Robert E. Bohanan, Marianne Krasny, Adam Welman

    This resource has been updated - find the current version here: https://qubeshub.org/publications/266Ecological QuestionIs there evidence for global warming in long term data on changes in dates of ice cover in three Wisconsin Lakes?This activity uses ice cover records from three lakes in...

  15. Characterizing the Quantitative Biology Curricula from Institutions Across the United States

    29 Apr 2015 | Teaching & Reference Material | Contributor(s): Wendy Jo Levenson, Monika Norea Herbst, Sam S Donovan, Alison N Hale

    This resource has been updated - find the current version here: https://qubeshub.org/publications/236Due to the increasingly quantitative nature of the biological sciences, many schools now offer majors in mathematical biology. As this is a new major, there is no standard for how the program...

  16. Chi-Square analysis of two point test cross data

    21 Jan 2015 | Teaching & Reference Material | Contributor(s): Bob Sheehy

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/746This flash tutorial simulates analysis of a 2 point test cross and will walk you through the analysis of two hypothetical traits. Your goal is to determine if these traits...

  17. Chi-Square Test video

    12 Jan 2015 | Teaching & Reference Material | Contributor(s): Bozeman Science, Paul Andersen

    This 12-minute video describes what a chi-square analysis is and illustrates 3 examples of how to perform one, increasing in complexity. The video starts with the classic example of a coin toss, then rolling die, and finally, with  realistic ecological...

  18. Citations

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Louise Mead, James Smith, Wendy Johnson, Michael Wiser, Robert Pennock, Amy Lark

    We present an inquiry-based curriculum based on the digital evolution platform Avida-ED (http://avida-ed.msu.edu). We designed an instructional sequence and lab book consisting of an introduction to Avida-ED and a set of three lessons focused on specific evolutionary concepts. These served to...

  19. Climate of Change: Interactions and Feedbacks between Water, Air and Ice

    24 Aug 2015 | Teaching & Reference Material | Contributor(s): Cindy Shellito, Becca Walker, Cynthia Fadem

    This resource has been updated - find the current version here: https://qubeshub.org/publications/289In this module students explore short-term climate variability resulting from atmosphere-ocean-ice interactions.

  20. Clustering coefficients

    02 Jun 2015 | Teaching & Reference Material | Contributor(s): Winfried Just, Hannah Lea Callender, Drew LaMar

    In this module we introduce several definitions of so-called clustering coefficients. A motivating example shows how these characteristics of the contact network may influence the spread of an infectious disease. In later sections we explore, both with the help of IONTW and theoretically,...