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  1. A BioGraphy of Life: How Graph Theory Makes Mathematics Recognizable, Relevant, and Research-Rich in Biology Education

    11 Oct 2016 | Teaching & Reference Material | Contributor(s): John R Jungck

    This resource has been updated - find the current version here: https://qubeshub.org/publications/241Biologists use graphs extensively in ecology, evolution, genetics, developmental biology, and biochemistry: phylogenetic trees, food webs, pedigrees, genetic networks, metabolic pathways,...

  2. A collaborative approach to quantitative biology course reform: It's better than doing it all by yourself

    19 Jul 2015 | Teaching & Reference Material | Contributor(s): Jeremy M Wojdak

    This resource has been updated - find the current version here: https://qubeshub.org/publications/233This is the abstract of an oral presentation given at the Society for Mathematical Biology Annual Meeting in Atlanta, GA in 2015. "Faculty often experience two distinct problems as...

  3. A Framework for Modeling to Encourage Interdisciplinary Conversations

    11 Oct 2016 | Teaching & Reference Material | Contributor(s): Carrie Diaz Eaton

    This resource has been updated - find the current version here: https://qubeshub.org/publications/209Here we present a framework for thinking about what models and modeling are, particularly to other disciplines. We encourage that differing disciplinary approaches are seen as part of a...

  4. A Framework for Teaching Modeling to Biologists

    10 Oct 2016 | Teaching & Reference Material | Contributor(s): Drew LaMar

    This resource has been updated - find the current version here: https://qubeshub.org/publications/210What are the modeling skills and metacognitive strategies of importance for the life sciences? In this talk, we describe a teaching and learning framework around modeling...

  5. A New Hub for QUBES based on the HUBzero Platform

    26 Jul 2015 | Teaching & Reference Material | Contributor(s): Michael McLennan

    This resource has been updated - find the current version here: https://qubeshub.org/publications/248The Quantitative Undergraduate Biology Education and Synthesis (QUBES) Consortium has a mission to connect educators across biology and mathematics with each other and with the latest...

  6. ABO Blood Group Frequencies

    14 Jan 2015 | Software (Off-site) | Contributor(s): John R. Jungck, Jennifer A. Spangenberg

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/756An Excel workbook in which students can calculate blood type frequencies through different approaches (Hardy-Weinberg, quadratic formula, and the EM algorithm).  The...

  7. Avida-ED Lab Book Summer 2017

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  8. Avida-ED Lab Book Summer 2017

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  9. Biomathematics education from the viewpoint of graduate biology

    21 Oct 2015 | Teaching & Reference Material | Contributor(s): Alexis White

    This resource has been updated - find the current version here: https://qubeshub.org/publications/253Biology and mathematics in early education are often presented as two distinct entities. The strength of both disciplines becomes highlighted when combined to create the cryptic study of...

  10. Biometeorology of Asthma in South Florida: From Statistical Analysis to Mathematical Modeling

    21 Oct 2015 | Teaching & Reference Material | Contributor(s): David Quesada

    This resource has been updated - find the current version here: https://qubeshub.org/publications/251Biometeorology has emerged as an interdisciplinary field dedicated to the study of the mutual influence between living things and the surrounding environment. Within this field, the study of...

  11. BIOQuest Summer Workshop 2016 – Bissell talk notes

    23 Jun 2016 | Teaching & Reference Material | Contributor(s): Ahrash Bissell

    This resource has been updated - find the current version here: https://qubeshub.org/publications/325Session title:Distributed creation, community guidance, and OER development: current models and emerging practicesSession description:Open educational resources (OER) encompass teaching,...

  12. Birthday Problem and Class Phenotypic Probabilities

    13 Jan 2015 | Software (Off-site) | Contributor(s): John R. Jungck, Annelise L. Myers, Jennifer A. Spangenberg

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/774An Excel sheet that allows students to input class data about various phenotypic features and then calculates the probability of other people having the same...

  13. Calculus, Zombies, Community, and QUBES

    25 Aug 2015 | Teaching & Reference Material | Contributor(s): Carrie Diaz Eaton

    This resource has been updated - find the current version here: https://qubeshub.org/publications/225At the interface of mathematics and biology emerges not only new research, but also a resurging call for education to meet the demands of this research.  Reports suggest foundational...

  14. Ch 11 Genetics and Statistics (Chi Square)

    19 Jan 2015 | Teaching & Reference Material | Contributor(s): Shannan Muskopf

    A PowerPoint slideshow which informs the viewer of  the purposes of chi square.  The PowerPoint includes  definitions of relevant terms,  step-by-step procedures for calculating chi square, and questions for individual thoughts.  The slides support one example...

  15. Chi-Square analysis of two point test cross data

    21 Jan 2015 | Teaching & Reference Material | Contributor(s): Bob Sheehy

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/746This flash tutorial simulates analysis of a 2 point test cross and will walk you through the analysis of two hypothetical traits. Your goal is to determine if these traits...

  16. Classical Genetics Simulator

    12 Jan 2015 | Software (Off-site) | Contributor(s): Ben Adamczyk

    Students manage virtual fly populations to determine the mode of inheritance for various traits in different populations. Students seek solutions using probabilities and testing the validity of their assumptions using chi-squared analysis. 

  17. Counting the Forest and the Trees: Quantitative Undergraduate Biology Education and Synthesis (QUBES) is a tool for Vision and Change

    27 Jul 2015 | Teaching & Reference Material | Contributor(s): DorothyBelle Poli

    This resource has been updated - find the current version here: https://qubeshub.org/publications/228/Vision and Change stressed the importance of quantitative skills for the future of science in the United States. In response to this plea, biologists and mathematicians came together to...

  18. GENI-ACT

    24 Jan 2016 | Software (Off-site)

    GENI-ACT allows collaborative genome annotation. Researchers or students can collectively suggest changes to an existing genome with supporting evidence. Changes can be ported back to genbank by exporting to a sequin file format. GENI-ACT also has ported the education components from IMG-ACT....

  19. Human Genetic Variation: A Flipped Exercise in Cultural Competency

    15 Jan 2015 | Teaching & Reference Material | Contributor(s): Shoumita Dasgupta, Katherine Larabee Tuttle

    "This interactive case discussion was created to emphasize the clinical relevance of population genetics, but is also a suitable resource for teaching the basic principles of population genetics while relating them to human genetic variation. Our understanding of human genetic variation has...

  20. IMMERSION Video

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Alondra Torres-Navarro