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Radiant Lite
24 Jul 2019 | Software (On-site) | Contributor(s): Drew LaMar
Stripped down version of Radiant on QUBES
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Outstanding Oaks: Quercus phenology at NEON sites
09 Oct 2018 | Software (On-site) | Contributor(s): Jackie Matthes
This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.
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Outstanding Oaks: Quercus phenology at NEON sites
09 Oct 2018 | Software (On-site) | Contributor(s): Jackie Matthes
This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.
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Investigating Trade-offs among Mammal Traits
07 Jun 2018 | Software (On-site) | Contributor(s): Jackie Matthes
This app draws on a large species-level dataset with metabolic, life history, and ecological traits of most living and recently extinct mammal species. Users can select and plot traits, fit linear models to the data, and query displayed datapoints.
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Modeling the Mechanisms of Evolution
25 May 2018 | Software (On-site) | Contributor(s): Jackie Matthes
Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.
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Principles of Biology BI212, Portland State University
28 Mar 2018 | Teaching & Reference Material | Contributor(s): Daniel J. Ballhorn
The uploaded document is the official of the second section of Principles of Biology (BI212, Winter 2018), Portland State University
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Introduction to Genome Browser: What is a Gene?
21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...
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Avida-ED
06 Oct 2017 | Software (Off-site) | Contributor(s): Robert T Pennock, Diane Blackwood
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/874Avida-ED is an award-winning educational application developed at Michigan State University...
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Facial Bones
29 Sep 2017 | Teaching & Reference Material | Contributor(s): Katherine Poole
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/873There are 14 beautiful facial bones six of them are paired and two of them are unpaired, for a grand total of 14 facial bones. The facial bones...
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Citations
27 Jul 2017 | Teaching & Reference Material | Contributor(s): Louise Mead, James Smith, Wendy Johnson, Michael Wiser, Robert Pennock, Amy Lark
We present an inquiry-based curriculum based on the digital evolution platform Avida-ED (http://avida-ed.msu.edu). We designed an instructional sequence and lab book consisting of an introduction to Avida-ED and a set of three lessons focused on specific evolutionary concepts. These served to...
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Citations
27 Jul 2017 | Teaching & Reference Material | Contributor(s): Louise Mead, James Smith, Wendy Johnson, Michael Wiser, Robert Pennock, Amy Lark
We present an inquiry-based curriculum based on the digital evolution platform Avida-ED (http://avida-ed.msu.edu). We designed an instructional sequence and lab book consisting of an introduction to Avida-ED and a set of three lessons focused on specific evolutionary concepts. These served to...
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Avida-ED Lab Book Summer 2017
27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser
The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection)
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Avida-ED Lab Book Summer 2017
27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser
The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection)
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IMMERSION Video
27 Jul 2017 | Teaching & Reference Material | Contributor(s): Alondra Torres-Navarro
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QUBES – A virtual synthesis center catalyzing change in undergraduate quantitative biology education
06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan
This resource has been updated - find the current version here: https://qubeshub.org/publications/198Presentation about QUBES given at HHMI Constellation Meeting: Advancing science students mastery of quantitative skills.
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Design, Implementation, and Evaluation of Faculty Mentoring Networks: A Model for Promoting Faculty Teaching Scholarship
06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Kristin Jenkins, Alison N Hale, Gabriela Hamerlinck
This resource has been updated - find the current version here: https://qubeshub.org/publications/199NGSS, AP Biology, and Vision & Change all highlight the importance of quantitative skills to understanding biology. The Quantitative Undergraduate Biology Education and Synthesis (QUBES,...
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Faculty Mentoring Networks: A Model for Promoting Teaching Scholarship in Quantitative Biology Education
06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Alison N Hale, Arietta Fleming-Davies, Gabriela Hamerlinck, Jeremy M Wojdak, Kristin Jenkins
This resource has been updated - find the current version here: https://qubeshub.org/publications/205/Faculty Mentoring Networks (FMNs) are designed to support the development of teaching scholarship by promoting teacher identity, self-efficacy, and knowledge/experience via four core design...
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Reimagining professional development: Faculty mentoring networks as a model for connecting projects and teachers
13 Mar 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan
This resource has been updated - find the current version here: https://qubeshub.org/publications/206The Quantitative Undergraduate Biology Education and Synthesis (QUBES) project is working to design, implement, and assess online collaborative communities that promote teaching scholarship....
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Pokemon Go and Ecology
17 Feb 2017 | Teaching & Reference Material | Contributor(s): Elizabeth C Davis-Berg, Joshua Drew, Stephanie Sardelis <stephanie.sardelis@gmail.com>
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/787These are resources associated with using Pokemon Go to teach concepts in Ecology. They can be used from Introductory non-majors classes up through graduate classes.
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Mathematical models and theorems
01 Feb 2017 | Teaching & Reference Material | Contributor(s): Winfried Just
In this module we introduce and compare various types of deterministic and stochastic mathematical models of disease transmission. We then illustrate how one can derive predictions of these models in the form of mathematical theorems.Level: Advanced undergraduate and graduate students of...