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  1. Outstanding Oaks: Quercus phenology at NEON sites

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    09 Oct 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.

  2. Outstanding Oaks: Quercus phenology at NEON sites

    0.0 out of 5 stars 

    09 Oct 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.

  3. Investigating Trade-offs among Mammal Traits

    5.0 out of 5 stars 

    07 Jun 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app draws on a large species-level dataset with metabolic, life history, and ecological traits of most living and recently extinct mammal species. Users can select and plot traits, fit linear models to the data, and query displayed datapoints.

  4. Modeling the Mechanisms of Evolution

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    25 May 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.

  5. Principles of Biology BI212, Portland State University

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    28 Mar 2018 | Teaching & Reference Material | Contributor(s): Daniel J. Ballhorn

    The uploaded document is the official of the second section of Principles of Biology (BI212, Winter 2018), Portland State University

  6. Introduction to Genome Browser: What is a Gene?

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    21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...

  7. Avida-ED

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    06 Oct 2017 | Software (Off-site) | Contributor(s): Robert T Pennock, Diane Blackwood

         This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/874Avida-ED is an award-winning educational application developed at Michigan State University...

  8. Facial Bones

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    29 Sep 2017 | Teaching & Reference Material | Contributor(s): Katherine Poole

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/873There are 14 beautiful facial bones six of them are paired and two of them are unpaired, for a grand total of 14 facial bones. The facial bones...

  9. Citations

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    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Louise Mead, James Smith, Wendy Johnson, Michael Wiser, Robert Pennock, Amy Lark

    We present an inquiry-based curriculum based on the digital evolution platform Avida-ED (http://avida-ed.msu.edu). We designed an instructional sequence and lab book consisting of an introduction to Avida-ED and a set of three lessons focused on specific evolutionary concepts. These served to...

  10. Citations

    0.0 out of 5 stars 

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Louise Mead, James Smith, Wendy Johnson, Michael Wiser, Robert Pennock, Amy Lark

    We present an inquiry-based curriculum based on the digital evolution platform Avida-ED (http://avida-ed.msu.edu). We designed an instructional sequence and lab book consisting of an introduction to Avida-ED and a set of three lessons focused on specific evolutionary concepts. These served to...

  11. Avida-ED Lab Book Summer 2017

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    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  12. Avida-ED Lab Book Summer 2017

    0.0 out of 5 stars 

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  13. Avida-ED Lab Book Summer 2017

    0.0 out of 5 stars 

    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  14. QUBES – A virtual synthesis center catalyzing change in undergraduate quantitative biology education

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    06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan

    This resource has been updated - find the current version here: https://qubeshub.org/publications/198Presentation about QUBES given at HHMI Constellation Meeting: Advancing science students mastery of quantitative skills. 

  15. Design, Implementation, and Evaluation of Faculty Mentoring Networks: A Model for Promoting Faculty Teaching Scholarship

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    06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Kristin Jenkins, Alison N Hale, Gabriela Hamerlinck

    This resource has been updated - find the current version here: https://qubeshub.org/publications/199NGSS, AP Biology, and Vision & Change all highlight the importance of quantitative skills to understanding biology. The Quantitative Undergraduate Biology Education and Synthesis (QUBES,...

  16. Faculty Mentoring Networks: A Model for Promoting Teaching Scholarship in Quantitative Biology Education

    0.0 out of 5 stars 

    06 Apr 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Alison N Hale, Arietta Fleming-Davies, Gabriela Hamerlinck, Jeremy M Wojdak, Kristin Jenkins

    This resource has been updated - find the current version here: https://qubeshub.org/publications/205/Faculty Mentoring Networks (FMNs) are designed to support the development of teaching scholarship by promoting teacher identity, self-efficacy, and knowledge/experience via four core design...

  17. Reimagining professional development: Faculty mentoring networks as a model for connecting projects and teachers

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    13 Mar 2017 | Teaching & Reference Material | Contributor(s): Sam S Donovan

    This resource has been updated - find the current version here: https://qubeshub.org/publications/206The Quantitative Undergraduate Biology Education and Synthesis (QUBES) project is working to design, implement, and assess online collaborative communities that promote teaching scholarship....

  18. Pokemon Go and Ecology

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    17 Feb 2017 | Teaching & Reference Material | Contributor(s): Elizabeth C Davis-Berg, Joshua Drew, Stephanie Sardelis <stephanie.sardelis@gmail.com>

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/787These are resources associated with using Pokemon Go to teach concepts in Ecology.  They can be used from Introductory non-majors classes up through graduate classes.

  19. Mathematical models and theorems

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    01 Feb 2017 | Teaching & Reference Material | Contributor(s): Winfried Just

    In this module we introduce and compare various types of deterministic and stochastic mathematical models of disease transmission. We then illustrate how one can derive predictions of these models in the form of mathematical theorems.Level: Advanced undergraduate and graduate students of...

  20. Bringing Real Ecological Data into the Classroom: DryadLab on QUBESHub

    0.0 out of 5 stars 

    09 Dec 2016 | Teaching & Reference Material | Contributor(s): Gabriela Hamerlinck, Kristin Jenkins

    This resource has been updated - find the current version here: https://qubeshub.org/publications/207Bringing Real Ecological Data into the Classroom: DryadLab on QUBESHub was presented at the annual meeting of the Association of College & University Biology Educators in 2016. 

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