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Tags: bioinformatics

All Categories (1-20 of 109)

  1. A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!

    28 Feb 2019 | Teaching Materials | Contributor(s):

    By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5

    1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University

    This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.

    https://qubeshub.org/qubesresources/publications/1092/?v=1

  2. Anne M Brown

    https://qubeshub.org/community/members/10267

  3. Assessment

    03 Oct 2018 | Teaching Materials | Contributor(s):

    By Arietta Fleming-Davies1, Jeremy M Wojdak2

    1. University of San Diego 2. Radford University

    This can be given at the beginning and end of the BIOMAAP program, in order to measure student changes in math anxiety.

    https://qubeshub.org/qubesresources/publications/617/?v=1

  4. Aubrey Allen Smith

    https://qubeshub.org/community/members/3661

  5. Barry Grant

    https://qubeshub.org/community/members/5944

  6. Ben Waldron

    https://qubeshub.org/community/members/3204

  7. Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

    26 Jun 2019 | Teaching Materials | Contributor(s):

    By Molly Phillips1, Debra Linton2, Libby Ellwood3, Natalie Douglas2, Lisa White4, Anna Monfils2

    1. iDigBio, Florida Museum of Natural History, University of Florida 2. Central Michigan University 3. La Brea Tar Pits and Museum, Natural History Museum of Los Angeles County 4. University of California Museum of Paleontology, UC Berkeley

    Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop

    https://qubeshub.org/qubesresources/publications/1324/?v=1

  8. Bioinformatics - Investigating Sequence Similarity

    31 Jan 2017 | Teaching Materials | Contributor(s):

    By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Komal Vig3

    1. Adams State University 2. Hampshire College 3. Alabama State University

    This laboratory module, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

    https://qubeshub.org/qubesresources/publications/56/?v=1

  9. Bioinformatics: CpG Islands

    17 Oct 2017 | Teaching Materials | Contributor(s):

    By Edward Himelblau

    California Polytechnic State University

    This is an introductory bioinformatics exercise intended for use in a genetics course.

    https://qubeshub.org/qubesresources/publications/147/?v=1

  10. Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    29 May 2019 | Teaching Materials | Contributor(s):

    By Ami Erickson

    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein...

    https://qubeshub.org/qubesresources/publications/1247/?v=1

  11. BIOINFORMATICS: TEACHING BIOLOGY AS A DATA SCIENCE! Removing obstacles for Integrating Bioinformatics Into Biology Curriculum

    Collections | 09 Jun 2019 | Posted by Carlos Christopher Goller

    https://qubeshub.org/community/groups/hits/collections/frameworks-and-competencies-for-bioinformatics-education

  12. BSL-4: Authorized Personnel Only

    24 Sep 2018 | Teaching Materials | Contributor(s):

    By Nicole Anthony

    Biological Sciences, Toronto District School Board

    National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection

    https://qubeshub.org/qubesresources/publications/795/?v=1

  13. Carlos Christopher Goller

    I am a Teaching Assistant Professor in the Department of Biological Sciences and teach in the Biotechnology Program at North Carolina State University in Raleigh, NC. My research interests include...

    https://qubeshub.org/community/members/1493

  14. Charles Hauser

    https://qubeshub.org/community/members/2800

  15. Chenglin Chai

    https://qubeshub.org/community/members/10465

  16. christos noutsos

    https://qubeshub.org/community/members/9363

  17. CourseSource Bioinformatics Resources

    Collections | 09 Jun 2019 | Posted by Carlos Christopher Goller

    https://qubeshub.org/community/groups/hits/collections/frameworks-and-competencies-for-bioinformatics-education

  18. Cystic Fibrosis Mechanism and Treatment

    01 Jul 2019 | Teaching Materials | Contributor(s):

    By HHMI BioInteractive

    This animation shows how mutations in an ion channel protein lead to the genetic disease cystic fibrosis. The animation also discusses how research on this protein has been used to develop...

    https://qubeshub.org/qubesresources/publications/1337/?v=1

  19. Daniel Proud

    https://qubeshub.org/community/members/11714

  20. Declare and intialize arrays in Java

    16 Apr 2018 | Teaching Materials | Contributor(s):

    By Hong Qin

    Spelman College

    UTC, CPSC1100

    https://qubeshub.org/qubesresources/publications/496/?v=1