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Using Synthetic Biology to Teach Data Science
05 Aug 2019 | Teaching Materials | Contributor(s):
By Margaret S Saha1, Beteel Abu-Ageel1, Sanjana Challa1, Xiangyi Fang1, Chai Hibbert1, Anna Isler1, Elias Nafziger1, Adam Oliver1, Hanqiu Peng1, Julia Urban1, Vivian Zhu1
College of William and Mary
Poster and supplemental materials on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
30 Jul 2019 | Teaching Materials | Contributor(s):
NMDS to Study Dead Wood Fungi Communities in Parks of New Jersey
By Maria Shumskaya1, Christopher Zambell1
Students use dead wood (saproxylic) fungi occurrence data from New Jersey, USA collected by students and faculty of Kean University to learn the basics of community ecology. Simple NMDS ordination...
Aquatic Nutrient Levels and Climate Change
16 Jul 2019 | Teaching Materials | Contributor(s):
By Elli Bosch1, Kaycee Faunce1, Amanda Thompson
Virginia Commonwealth University
This learning module was designed to introduce students to the aquatic nutrients nitrogen and phosphorus, their roles in ecosystem function and nutrient pollution, and what impacts climate change...
Striped Bass: A Regulatory Success Story
12 Jul 2019 | Teaching Materials | Contributor(s):
By J. Alexander McCrickard1, Angela Hanretty1, Amanda Thompson1
This module examines the Maryland striped bass moratorium (1985-1989) as a fisheries management success story. Maryland DNR striped bass young of the year data is utilized for least squares linear...
The p53 Gene and Cancer
01 Jul 2019 | Teaching Materials | Contributor(s):
By HHMI BioInteractive
This tutorial describes the structure and function of the p53 protein, how its activity is regulated in cells, and how mutant versions of p53 can lead to cancer.
National Ecological Observatory Network: A Data Source For Your Classroom
26 Jun 2019 | Teaching Materials | Contributor(s):
By Megan A. Jones
National Ecological Observatory Network
Abstract for a poster on NEON resources for use in research and education presented at the 2019 BioQUEST & QUBES Summer Workshop.
Abstract for poster on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom
By Molly Phillips1, Debra Linton2, Libby Ellwood3, Natalie Douglas2, Lisa White4, Anna Monfils2
1. iDigBio, Florida Museum of Natural History, University of Florida 2. Central Michigan University 3. La Brea Tar Pits and Museum, Natural History Museum of Los Angeles County 4. University of California Museum of Paleontology, UC Berkeley
Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
Sequence Similarity in Developmental Biology - A Bioinformatics Exercise Using Myostatin
19 Jun 2019 | Teaching Materials | Contributor(s):
By Barbara Murdoch
Eastern Connecticut State University
This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of...
11 Jun 2019 | Teaching Materials | Contributor(s):
By James Burton Deemy
College of Coastal Georgia
In this exercise students work in groups to design an agroecosystem to feed a Mars Colony while accounting for space and energy transfer limitations.
This is an exercise in island biogeography that allows students to reconstruct splits in the evolutionary history of several hypothetical frog species.
Adaptation of Investigating human impacts on stream ecology: locally and nationally
10 Jun 2019 | Teaching Materials | Contributor(s):
By Catherine Sughrue Etter
Cape Cod Community College
TIEE Module- How does nutrient pollution impact stream ecosystems locally and nationally?
Measuring Success for Collections: Educational Products and Outcomes
07 Jun 2019 | Teaching Materials | Contributor(s):
By Anna Monfils1, Molly Phillips2, Libby Ellwood3, Debra Linton1, Lisa White, Natalie Douglas, Shari Ellis, Sam S Donovan4
1. Central Michigan University 2. iDigBio, Florida Museum of Natural History, University of Florida 3. iDigBio 4. University of Pittsburgh
Presentation at the 34th Annual meeting of the Society for the Preservation of Natural History Collections
Answer Checking - Modified for Environmental Data Analysis/Statistics Course
06 Jun 2019 | Teaching Materials | Contributor(s):
By Jennifer Prairie
University of San Diego
Modified answer checking worksheet from original BIOMAAP resource to include two additional questions relating to probability/P-values.
Exploring how climate will impact plant-insect distributions and interactions using open data and informatics
By Wendy Clement1, Kathleen Prudic2, Jeffrey Oliver3
1. The College of New Jersey 2. University of Arizona 3. University of Arizona Libraries
This teaching module provides an entry point for students to learn about data science, open data repositories (e.g., citizen science data), and species distribution modeling to study the effects of...
The ml4bio Workshop: Machine Learning Literacy for Biologists
02 Jun 2019 | Teaching Materials | Contributor(s):
By Fangzhou Mu1, Chris Magnano1, Debora Treu2, Anthony Gitter1
1. University of Wisconsin - Madison 2. Morgridge Institute for Research
Presentation on machine learning literacy for biologists at the 2019 Great Lakes Bioinformatics Conference
Intro to BIOMAAP - Student Math Anxiety Overview - Teaching Notes - Boersma
01 Jun 2019 | Teaching Materials | Contributor(s):
By Kate S Boersma
Teaching notes from my application of the BIOMAAP math anxiety materials in my BIOL305 Ecology course for biology majors.
Processes that Regulate Patterns of Species and Genetic Diversity - Intro Environmental Science
By Megan Kelly
Arrupe College of Loyola University Chicago
This activity was adapted for use in an intro non-majors Environmental Science course, with an emphasis on collaborative data collection.
Frayer model growth mindset
By Heather McGray
San Diego City College
A Frayer model worksheet for the concept of growth mindset.