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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Simple, Accessible River-Based Field Investigation of Riverine Microplastics
    Scientists have discovered that microplastic pollution is ubiquitous in the environment, but the small size of these microscopic pollutants prohibits most people from recognizing their prevalence....

    Keywords: environmental sciencemicroplastic pollutionurban waterswasteenvironmental studiesfield-based learningfreshwater ecologywater qualityRiversSingle-use plasticfreshwater sciencewater ecologyField ExperiencesRiver Ecologyfield workThe Scientific MethodRiver Field Studies Networkfield courses

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    What Shapes a River: Field Lesson
    This lesson introduces students to field methods and theoretical concepts regarding the factors that shape river environments and ecosystems. Introductory material is followed by instruction in...

    Keywords: substrateRiver Field Studies Network Fluvial GeomorphologyWolman Pebble CountBankful FlowSediment Transport.

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    A Changing Climate in the Hawaiian Wet Forest: In-Person and Virtual Curriculum for Field Courses at Puʻu Makaʻala NAR
    Curriculum for Puʻu Makaʻala Huakaʻi with the National Ecological Observatory Network (NEON), developed by Teaching Change. This module was created to guide Teaching Change Field Courses at Puʻu...

    Keywords: climate changecommunityenvironmental sciencephenologyhuman-environmental interactionsNEONhawai'icareer connected

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    Phage Comparative Genomics Lab Manual
    A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform...

    Keywords: phageCUREcourse-based research experiences (CUREs)Comparative genomicsSEA-PHAGES

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    Ecology/Environmental Biology Molecular Case Studies for Molecular CaseNet - YouTube
    Biome Institute 2021, Fall Working Group Summary Video

    Keywords: climate changebiofilmcoffeecoral bleachingMolecular structuremolecular visualizationMolecular Case Studycholera

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    Using the IEDB to Predict Proteasomal Cleavage Events and T-cell Epitopes
    Research experiences provide a valuable view into the world of science and a great way to explore new fields and careers while developing critical thinking skills. The development and maintenance...

    Keywords: biologydatabaseImmunologydata sciencebioinformaticsBiotechnologyt-cellengineeringantibodyBioengineeringAntibody EngineeringlymphocytesProteinNetChopepitopeIEDBB-cellProteasomeProteasomal Cleavage

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    Small is Beautiful: OER for Cultural Change in a STEM Institution
    This report serves as a resource for faculty, staff, and students interested in co-creating Open Education Resources (OERs). In particular, we embrace OERs as an invitation to co-create, revise, ...
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    STEM as Culture: Exploring exclusion and inclusion in mathematics and biology
    This is a paper given as a plenary lecture at the second CalcConf in Bergen, Norway, June 2023. The paper explores how marginalization in society & living between worlds becomes a superpower in...

    Keywords: calculusbiocalculusrule of fivemarine biologyco2Microagressionsmauna keamauna loafeministtestimonioindigenous epistomologyanzalduagutierrezdisciplinary microaggressions

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    Build Multiomic and Visualization Skills in Bioscience Lecture
    This resource promotes inclusive learning by using all free platforms to extend the central dogma to an applied experience. Genomics is focused on with literature reviews that are performed to...

    Keywords: geneticsBiochemistryBiology and Biochemistry EduationProtein StructureBioinformatics and GenomicsFunctional GenomicstranscriptomicsproteomicsRNAseqClinical genomicsprotein structure modelingInclusive teaching3D protein structure /function analysisinclusive classrooms3D protein structuresinclusivegene

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    Measuring Size and Area of Digitized Specimens using ImageJ
    Use ImageJ to analyze morphological characters in digital images of natural history specimens. Skills are transferable to many organisms and other morphological measurements.

    Keywords: ImageJnatural history collectionscourse-based research experiences (CUREs)digitized natural history collections

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    Putting specimens on the map: An introduction to georeferencing
    Use GEOLocate to assign geographic coordinates to natural history collections specimens

    Keywords: mappingnatural history collectionscourse-based research experiences (CUREs)digitized natural history collectionsgeoreferencing

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    Open Practices Learning Community Curriculum
    This is a learning community curriculum designed to engage participants in discussions, short readings and mini-exercises to explore basic tools for Open Educational Practices (OEP)

    Keywords: s-jediopen licensing

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    Learn biotechnology, biophysics and business through scientific thinking and innovation
    Scientific, leadership and innovation skills are also an integral framework of the curriculum. All of them together or individually are important for enhancement of knowledge, critical thinking,...

    Keywords: educationbusinessBiotechnologybiophysicsleadershiprecombinant DNAgroup workcloninginnovationscientific thinkingplasmid

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    Diversity and Inclusion in Animal Behavior – ABI Faculty Development Program
    In this course, students will learn about the study of behavior from an evolutionary perspective. We will look at the mechanisms underlying behavior and how behavior develops in an animal’s...

    Keywords: ecologyanimal behaviorpsychologyDiversity and Inclusion

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    Designing an Anti-Racist Syllabus
    The Alliance for the Black Community (ABC) developed a workshop to help faculty at California State University East Bay redesign their syllabi to incorporate anti-racist pedagogical practices.

    Keywords: teaching resourceundergraduate educationteaching philosophyUndergraduate STEM educationdiversity equity and inclusioncourse syllabus designAnti-racist practicesanti-racist pedagogy

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    Cell Cycle and Mitosis
    This module introduces activities that allow students to walk through the cell cycle and mitotic cell division processes. As part of the activities, students learn about and apply knowledge of...

    Keywords: introductory biologyQuantitative reasoningInterdisciplinary STEMquantitative biologyinterdisciplinaryquantitative skillscell functioncell cyclemitosisCell DivisionMitotic Indexcalculating meanstumorNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical Analysisstandard errormitotic phaseinterphase

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    Before You Start Publishing on QUBES
    This handy guide follows the Instructions for Authors to keep together all the text that can then be copied during the publication process. Notes and comments in this document are italicized so...

    Keywords: QUBESOERpublish on QUBESpublish

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    Collaborative case writing and field testing with Molecular CaseNet brings together discipline specific expertise for innovative pedagogical tools in the classroom
    Molecular case studies (MCS) use an interesting story as a hook , followed by exploration of biochemistry of one or more molecules of interest.  They can be useful in teaching about macromolecule...
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