You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    QB@CC Poster for NABT 2020
    This is a poster presentation at the 2020 NABT Annual PD Conference. This poster describes the goals of QB@CC project, progress in the first year and an update on the upcoming events.

    Keywords: quant bioQuantitative reasoningcommunity collegesquantitative biologyquantitative skillsincubatorsqbccBiology and Math CollaborationOERsNABT 2020NSF grantRCN UBE grantQB learning modules

    1165

    views

    579

    downloads

    0

    comments

    0

    adaptations

    Flying With Swallows – a Model for Undergraduate Research-Based Learning
    Moreno Valley College, a two-year community college in Southern California, experiences an annual migration of cliff swallows. The presence of these birds inspired the development of the...

    Keywords: researchresearch-based classroom instruction

    786

    views

    186

    downloads

    2

    comments

    0

    adaptations

    Integration of Bioinformatics into Life Science Curricula: Community Development, Dissemination, and Assessment of a NIBLSE Learning Resource
    Big data and computational tools have transformed the way we address biological questions. To prepare undergraduates for tomorrow’s challenges, life science curricula should integrate the...

    Keywords: bioinformaticsNIBLSELife Science

    1336

    views

    194

    downloads

    2

    comments

    0

    adaptations

    BioSkills Guide
    The BioSkills Guide comprises program- and course-level learning outcomes for the Vision and Change core competencies that elaborate what general biology majors should be able to do by the time...
    4981

    views

    2187

    downloads

    0

    comments

    0

    adaptations

    IPMpack: an R package for Integral Projection Models
    IPMpack is an R package (R Development Core Team 2013) that allows users to build and analyse Integral Projection Models.

    Keywords: RR-Forgeanimalbiostatisticscomparative analysisecologylongitudinal datamodel comparisonmodel estimationprojectionssurvivaltime seriestrajectoryIPMintegral projection modelsResources @ QUBES - Software

    1444

    views

    401

    downloads

    0

    comments

    0

    adaptations

    Cell Signaling Pathways - a Case Study Approach
    Signaling and gene expression are fundamental to cell biology and developmental biology. Although these topics are highly interrelated, they typically appear in separate units in a course. We use a...

    Keywords: signal transductiongene expressionCell communicationgenetic disordersregulation of enzyme activity

    5075

    views

    2529

    downloads

    0

    comments

    0

    adaptations

    Cross-Course Public Health Project on Infectious Disease
    The need for collaborative, public health education has never been more important. Students increasingly require necessary skills in effectively communicating critical information to the general...

    Keywords: infectionpublic healthVaccinespathogenesisantibiotics

    524

    views

    486

    downloads

    0

    comments

    0

    adaptations

    Analysis of Microbiomes Using Free Web-Based Tools in Online and In-Person Undergraduate Science Courses
    Our understanding of microbiomes, or the collection of microorganisms and their genes in a given environment, has been revolutionized by technological and computational advances. However, many...

    Keywords: microbiomeDNA SubwayCyVerseCourse based undergraduate researchQIIME2ranacapa

    4045

    views

    267

    downloads

    0

    comments

    0

    adaptations

    Garden Variety Mutations: Using Primary Data to Understand the Central Dogma in Large-Lecture Introductory Biology
    The ability to interpret and create an argument from data is a crucial skill for budding scientists, yet one that is seldom practiced in introductory courses. During this argumentation module,...

    Keywords: mutationtranscriptiongene expressioncentral dogmatranslationgel electrophoresisGenotype/Phenotype

    3215

    views

    219

    downloads

    0

    comments

    0

    adaptations

    2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
    This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.

    Keywords: spatialsensitivity analysisgene regulatory networksstochasticbifurcationmetabolic networkselectrophysiologytransductionrate lawsbiochemical reactions

    371

    views

    81

    downloads

    0

    comments

    0

    adaptations

    2005-Minna_Wedenberg-Pharmacokinetic modeling of gastric emptying
    The development of new drug substances is a complex, time consuming and expensive process. Reducing the time for drug development and avoiding late termination of candidate drugs are important...

    Keywords: paracetamolpharmacokineticsstomachsmall intestinesulfapyridine

    109

    views

    37

    downloads

    0

    comments

    0

    adaptations

    The impact of diet and antibiotics on the gut microbiome
    The goal of this article is to describe an active learning exercise that can be used in a variety of advanced microbiology courses, including bacterial physiology, ecology, or systems biology. The...

    Keywords: microbiomeenvironmental controlhost responsemetabolites

    1964

    views

    218

    downloads

    0

    comments

    0

    adaptations

    Harnessing the Power of the Immune System: Influenza Vaccines
    Because most people have been infected by and/or immunized against influenza, students should know how the immune system responds to the infection and how vaccines protect against disease. Vaccines...

    Keywords: VaccinesInfluenzaImmunizationVaccine efficacy

    2487

    views

    472

    downloads

    0

    comments

    0

    adaptations

    Using Pathway Maps to Link Concepts, Peer Review, Primary Literature Searches and Data Assessment in Large Enrollment Classes: An example from teaching ecosystem ecology
    As with many other complex topics, teaching ecosystem ecology can be particularly difficult in terms of helping students understand the relationships between the various component parts. We...

    Keywords: energyecosystemNutrientsPathway

    1225

    views

    490

    downloads

    0

    comments

    0

    adaptations

    Small Organisms with Big Consequences: Understanding the Microbial World Around Us
    Creating a hands-on lab that conveys important information while simultaneously allowing for student autonomy can be difficult. This is particularly true for the field of microbiology, in which...

    Keywords: disease transmissionmicrobiologymicrobiomeliterature reviewPeer reviewPathogensHealth and WellnessThe Scientific Method

    2459

    views

    183

    downloads

    0

    comments

    0

    adaptations

    An Interrupted Case Study on Urban Prairie Restoration
    Engaging students in meaningful discussions can be a challenging task for science instructors, especially in introductory courses. The story-telling approach used in case studies can increase...

    Keywords: urban ecologyPrescribed fireEcosystem Servicesecological restorationwoody encroachmentrangeland ecology

    362

    views

    50

    downloads

    0

    comments

    0

    adaptations

    2015-Differential_Equations-CUPM_Curriculum_Guide_to_Majors_in_the_Mathematical _Sciences
    This is a report from the working group charged with making recommendations for the undergraduate curriculum in differential equations.

    Keywords: differential equationscurriculumCUPM

    206

    views

    42

    downloads

    0

    comments

    0

    adaptations

    Andy Giordano discusses how he generated a fulfilling life through science
    Andy Giordano talks to us about how he has been able to generate a fulfilling life through his pursuit of science. This is a talk relevant for all ages and professional statuses. Whether you are an...
    1193

    views

    85

    downloads

    0

    comments

    0

    adaptations

    HSI - Student Research Journal - Vol.3 Issue 1 - Summer 2021
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 3 - Issue 1 - Summer 2021...

    Keywords: scientific methodscience education

    571

    views

    83

    downloads

    0

    comments

    0

    adaptations

    HSI - Student Research Journal - Vol.1 Issue 3 - Fall 2020
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 1 - Issue 3 - Fall 2020...

    Keywords: scientific methodscience education

    491

    views

    99

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search