You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Build-a-Genome Lab Manual for RFP Synthesis
    This lab manual describes a multi-week lab project for the design, assembly from oliognucleotides, cloning, and sequencing of the RFP gene. This resource was developed as part of NSF Award...
    822

    views

    465

    downloads

    0

    comments

    0

    adaptations

    Atmospheric Carbon Dioxide Data Analysis - Draft (1)
    Students will be able to analyze real data to review basic statistics. Students will be able to work as a group to determine the best way to present their data.
    782

    views

    189

    downloads

    0

    comments

    0

    adaptations

    REMNet Tutorial, R Part 5: Normalizing Microbiome Data in R 5.2.19
    Video on normalizing microbiome data from the Research Experiences in Microbiomes Network

    Keywords: geneticsstatisticsdata analysisgraphingRStudioVideoexperimental designR programming languagemicrobiomesstudent researchinterdisciplinary educationlimnologyeco-informaticsresearch in the classroomtidyverseWorking with datasetsREMNet

    1323

    views

    442

    downloads

    0

    comments

    0

    adaptations

    List of resources and support communities dedicated to biology undergraduate education
    Ecologists new to teaching and evidence-based teaching practices often feel alone and without support. There are resources and communities that can help them become better instructors and...

    Keywords: teaching resource

    1095

    views

    381

    downloads

    0

    comments

    0

    adaptations

    Taking a Second Look: Investigating Biology with Visual Datasets
    An article exploring the use of visual datasets as an educational aid for biology students.

    Keywords: Evolutionpedagogyclassificationphylogenyvisual learningResources @ QUBES - Teaching & Reference

    1289

    views

    212

    downloads

    0

    comments

    0

    adaptations

    Reimagining professional development: Faculty mentoring networks as a model for connecting projects and teachers
    iDigBio webinar providing background on the QUBES project, examples of how faculty mentoring networks have made it possible for diverse educational programs to reach new audiences, and a framework...

    Keywords: webinar

    942

    views

    161

    downloads

    0

    comments

    0

    adaptations

    Faculty Mentoring Networks: A Model for Promoting Teaching Scholarship in Quantitative Biology Education
    Presentation given at NABT 2016 on Faculty Mentoring Networks and teaching scholarship in quantitative biology education.

    Keywords: faculty mentoring networksquantitative biology education

    1171

    views

    184

    downloads

    0

    comments

    0

    adaptations

    Bioinformatics: CpG Islands
    This is an introductory bioinformatics exercise intended for use in a genetics course.

    Keywords: geneticsepigeneticsbioinformaticsNIBLSEcpggenome database

    1569

    views

    261

    downloads

    0

    comments

    0

    adaptations

    Pennies to The Moon Data Byte Series
    This series of Rbyte activities explores the concept of debunking using Fermi Estimation, R, and ChatGPT.

    Keywords: RprogrammingOpen SourceOpen Sciencedata literacycalling bullProgramming practiceFermi EstimationChatGPTGoogle CoLab

    156

    views

    115

    downloads

    0

    comments

    0

    adaptations

    When food gets scarce: how plant-pollinator interactions will shift under global change
    In this lesson, students review plant-pollinator interactions and global change concepts. Next, students interpret graphs of pollinator visitation data to Scarlet Gilia. Then, students view and...

    Keywords: mutualismsgraph interpretationCommunity Ecologyplantsfmnglobal changepollinatorsBioGraphIrepresentation in STEM

    280

    views

    110

    downloads

    0

    comments

    0

    adaptations

    1-155-CruiseControl-ModelingScenario
    In this project we illustrate the design of a proportional-integral-derivative (PID) cruise control algorithm for an automobile. PID control is one of the most common techniques in control...

    Keywords: PID controllerfeedback controlControl theorycruise controlautomobileclosed-loop controlinput-ouputblock diagram

    298

    views

    533

    downloads

    0

    comments

    0

    adaptations

    Defenses against predation: Interpreting graphs of predator behavior
    In this lesson, students discuss anti-predator defense mechanisms and the types of cues defenses provide to predators. Students then interpret graphs of behavior of arthropod predators when...

    Keywords: graph interpretationfmndata literacyinterspecific interactionsconsumptionBioGraphIrepresentation in STEMarthropodsaposematismphenotypic variationtortoise beetlecarton-nest antspraying mantisorb-weaving spider

    468

    views

    352

    downloads

    0

    comments

    0

    adaptations

    Count me in: Increasing early detection of invasive species with community science
    In this lesson, students interpret a map of species occurrences. Then, students view and reflect on an interview with biologist Dr. Jennifer Dean, whose research includes the map that they...

    Keywords: graph interpretationInvasive SpeciesAquatic invasive speciesspatial datawomen in steminvasive plantsCitizen and Community ScienceBioGraphIrepresentation in STEMmap interpretationiMapInvasives

    600

    views

    408

    downloads

    0

    comments

    0

    adaptations

    Biodiversity Counts! Making sense of diversity metrics and graphs
    In this lesson students 1) become familiar with various graphs that are used to study diversity patterns within and across sites, 2) learn about some of the questions that can be addressed by...

    Keywords: graph interpretationfmnmetabarcodingbiodiversity literacyBioGraphIrepresentation in STEMalpha diversitybeta diversity

    1114

    views

    757

    downloads

    3

    comments

    0

    adaptations

    2004-Mitchell-von Meien-Krieger-Dalsenter-A review of recent developments in modeling of microbial growth kinetics
    Mathematical models are important tools for optimizing the design and operation of solid-state fermentation (SSF) bioreactors. Such models must describe the kinetics of microbial growth.

    Keywords: Filamentous Fungisolid-state fermentationgrowth kineticsdiffusion-reactionoxygen transfer

    144

    views

    47

    downloads

    0

    comments

    0

    adaptations

    1994-Paul_Davis-Asking Good Questions about Differential Equations
    A general essay about the Rule of Three – numerical, algebraic, and graphical perspectives + modeling with one illustration about Irish population.

    Keywords: questionspopulationnumericalphysical contextgraphicalalgebraicIreland

    101

    views

    44

    downloads

    0

    comments

    0

    adaptations

    Why representation matters: Interpreting data to identify factors that affect Black students’ persistence in STEM
    In this lesson, learners interpret a table summarizing the factors influencing the persistence of Black students at an HBCU. Then, learners view and reflect on an interview with science education...

    Keywords: biologydata interpretationhbcuSelf-EfficacyBioGraphIrepresentation in STEM#BIPOCinSTEMBlack representation in STEM

    2087

    views

    923

    downloads

    0

    comments

    0

    adaptations

    Make Your Move: Interpreting graphs of pollinator behavior
    In this lesson, students interpret graphs of pollinator movement behavior. Then, students view and reflect on an interview with community ecologist Dr. Suann Yang., who collected the data that they...

    Keywords: graph interpretationCommunity EcologyBiodiversitycompetitiondata literacypollinationinvasive plantsinterspecific interactionsBioGraphIrepresentation in STEM#AAPIinSTEM#BIPOCinSTEM

    3224

    views

    1431

    downloads

    1

    comments

    0

    adaptations

    Applying Universal Design for Learning (UDL) Principles to Case Studies
    This is a presentation for the 2022 BIOME meeting.
    610

    views

    200

    downloads

    0

    comments

    0

    adaptations

    5-005-Dialysis-ModelingScenario
    We design a compartment model of a kidney dialysis machine and compare 3 and 9 compartments for the machine as well as determine the effect of change in one of the parameters in the model on the...

    Keywords: countercurrent multiplierkidneydialysisconcurrentcompartment

    265

    views

    383

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search