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    Nextstrain adaptations for Understanding COVID-19
    This resource introduces students to the use of Nextstrain and Nextclade to visualize the phylogeny of SARS-CoV-2 variants of concern and variants of interest. Terminology and an introduction to...

    Keywords: uniprotCOVID19SARS-CoV-2NextstrainNextcladeSpike glycoproteinVariants of Concern

    987

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    Make Your Move: Interpreting graphs of pollinator behavior
    In this lesson, students interpret graphs of pollinator movement behavior. Then, students view and reflect on an interview with community ecologist Dr. Suann Yang., who collected the data that they...

    Keywords: graph interpretationCommunity EcologyBiodiversitycompetitiondata literacypollinationinvasive plantsinterspecific interactionsBioGraphIrepresentation in STEM#AAPIinSTEM#BIPOCinSTEM

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    Measuring Size and Area of Digitized Specimens using ImageJ
    Use ImageJ to analyze morphological characters in digital images of natural history specimens. Skills are transferable to many organisms and other morphological measurements.

    Keywords: ImageJnatural history collectionscourse-based research experiences (CUREs)digitized natural history collections

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    Sharing Stories: Developing OER around Podcasts
    Our team met in the fall of 2021 to discuss and develop resources around podcasts. We created lists of podcast episodes for several courses, learned about listening guides, shared assignment...

    Keywords: podcastslistening guides

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    Putting specimens on the map: An introduction to georeferencing
    Use GEOLocate to assign geographic coordinates to natural history collections specimens

    Keywords: mappingnatural history collectionscourse-based research experiences (CUREs)digitized natural history collectionsgeoreferencing

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    How We Help: Human elements of restoration ecology
    In this lesson, students recall the basics of restoration ecology, interpret and predict several graphs that explain restoration manager characteristics, and reflect on an interview with...

    Keywords: graph interpretationEcosystem Ecologyfmnconservation biologydata literacyinvasive plantsLGBTQRestoration Ecologyriparian ecologyNatural Resource ManagementBioGraphIrepresentation in STEM

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    Mapping Specimen Occurrence Data in QGIS
    Use digitized natural history collection occurrence data from the Global Biodiversity Information Facility (GBIF) to map the distribution of the beaver in the state of Oregon from 1800-2020 using QGIS

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsQGIS

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    Spatial Analysis with QGIS
    Map specimen data points using QGIS, connect them to form a polygon using the Concave Hull plugin, and calculate the range of a species to examine how it changes over time.

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)spatial analysisdigitized natural history collectionsQGIS

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    Prosecutor’s Fallacy and Mammograms Case Study
    An introduction to Prosecutor’s Fallacy, and False Positives/Negatives. By Dr. Diaz Eaton, Bates College, for use in DCS 105A, and inspired by Calling Bull & Calculated Risks.

    Keywords: ProbabilityExcelcalling bullMammogramsData UnderstandingVisualizing Outcomes

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    Riverbird distributions and habitat use
    Riverbirds are widespread, use diverse riparian habitats, and respond rapidly to changing conditions. Students can apply riverbird data to evaluate hypotheses about these responses, while gaining...

    Keywords: logistic regressionHabitat selectionRiver Field Studies NetworkWaterfowl raptorkingfisherheronfocal speciesmonitorriverbank

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    Bates College DCS 105 Calling Bull: Data Literacy and Information Science Course Slides
    Slides that accompany the Course DCS 105 Calling Bull: Data Literacy and Information Science from Bates College

    Keywords: datamisinformationslidesCalling BullshitBates CollegeCourse Material

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    Critical inquiry for inclusive teaching of statistics
    Professional development workshop slides to help curate conversations in teaching statistics with a critical inquiry lens.

    Keywords: statisticsdata sciencefaculty developmentInclusive teachingbuilds

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    BEDE Network Data Science Skills Curriculum Map
    The Biological and Environmental Data Education (BEDE) Network has produced this data science skills curriculum map as a flexible tool to help instructors highlight data science skills that they...

    Keywords: quantitative skillsscientific literacyCurriculum developmentdata science skills trainingdata literacy skills

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    Building an Inclusive Botany - Structuring in Class Discussions
    Driven by the national conversation on systemic racism, ongoing inequities, appeals to decolonize science, and the many recent calls for diversity, equity, accessibility, and inclusion, we use...

    Keywords: botanyplant sciencediversityAccessibilityHistory of Sciencetraditional knowledgeCommunityScienceColonialismSpecimen Digitization

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    Responses to Climate Change in California Chipmunks: Move, Adapt, or Die
    A series of three modules using data from natural history museum collections to examine responses to climate change in multiple chipmunk species. Elevation and morphological data, beginner skills...

    Keywords: statisticsmodelingmodulemorphologysummary statisticsmodulesclimate datamuseumsclimate changeundergraduate educationR programming languageprogrammingelevationnatural history museumsmammalssmall mammals community dynamicsmuseum collectionsVertebrate Morphologyopen educational resourceR programming environment

    1500

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    DCS 105 Calling Bull F24 Schedule
    Schedule overview for Bates College Course DCS 105 Calling Bull

    Keywords: datacalling bullmisinformationBates CollegeSchedule

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    Phage Comparative Genomics Lab Manual
    A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform...

    Keywords: phageCUREcourse-based research experiences (CUREs)Comparative genomicsSEA-PHAGES

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    SARS-CoV-2: Understanding, Applying and Communicating Science
    The ability to integrate process of science training with necessary skills in applying and communicating core theories in biological science and biology quantification, has been brought into focus...

    Keywords: process of science#COVID19 #SARSCOV2 #SciComm #studentdiscovery

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    SARS-CoV-2: Understanding, Applying and Communicating Science
    The ability to integrate process of science training with necessary skills in applying and communicating core theories in biological science and biology quantification, has been brought into focus...

    Keywords: #COVID19 #SARSCOV2 #SciComm #studentdiscovery

    1001

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    Get Started With GIS in Open Source Python Workshop
    There are a suite of powerful open source python libraries that can be used to work with spatial data. Learn how to use geopandas, rasterio and matplotlib to plot and manipulate spatial data in...

    Keywords: data analysisdatadata typesdata visualizationdata scienceearth sciencepythonremote sensingGeographic Information System (GIS)data science educationcomputer programmingwildfireearth anlaytics

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