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Following the Data
02 Apr 2020 | Teaching Materials | Contributor(s):
By Anna Monfils1, Debra Linton1, Molly Phillips2, Libby Ellwood3
1. Central Michigan University 2. iDigBio, Florida Museum of Natural History, University of Florida 3. iDigBio
The video and exercise provides insight into how researchers are using digital data resources to investigate biodiversity in prairie fen wetlands.
Searching for disability as biodiversity in digitized natural history collections
27 Mar 2020 | Teaching Materials | Contributor(s):
By Kaitlin Stack Whitney
Rochester Institute of Technology
This module uses digitized natural history and biodiversity collections to explore if, how, and whether disability can be studied in nonhumans as a form of biodiversity.
Diseasebots HEXBUG Lab
24 Mar 2020 | Teaching Materials | Contributor(s):
By Skylar Hopkins
This module explores the effects of host density on contact rates and transmission of pathogens using a hands-on experiment with HEXBUG robots.
23 Mar 2020 | Teaching Materials | Contributor(s):
By Anna Monfils
Central Michigan University
This is an introduction to the idea of data visualization and the importance of presenting data for understanding.
Communicating with Data: Digital Data Resources
22 Mar 2020 | Teaching Materials | Contributor(s):
By Anna Monfils1, Debra Linton1
Students access, clean, configure, and standardize a dataset and create a relevant and scientifically valid data visualization to communicate science.
Communicating with Data: Infographic with Digital Data
Working collaboratively in teams of 2-4 researchers, students engage in targeted projects to address critical information and research needs using digital biodiversity data.
21st Century STEM Workforce Skills
This activity includes a leadership assessment and associated exercise to encourage the development of 21st Century STEM Skills.
GBIF Tutorial - BLUE Resource
19 Mar 2020 | Teaching Materials | Contributor(s):
By Libby Ellwood
A user guide and video instructions for GBIF
iDigBio Tutorial - BLUE Resource
By Molly Phillips
iDigBio, Florida Museum of Natural History, University of Florida
A user guide and video instructions for iDigBio
Arctos Tutorial - BLUE Resource
By Erica Krimmel
A user guide and video instructions for Arctos
By Rebecca Renirie
Data ethics and the use of digital data
Does Organelle Shape Matter? Exploring Cell Shape through the Allen Cell Explorer and High-content Microscopy Datasets
13 Mar 2020 | Teaching Materials | Contributor(s):
By Carlos Christopher Goller1, Kaitlyn Casimo
North Carolina State University
The morphology and localization of structures inside the cell are often assumed to fit the ideal images found in biology textbooks. This interrupted case study using high-throughput microscopy data...
Advanced Sequencing Technologies & Bioinformatics Analysis
18 Feb 2020 |
Posted by Wilson Leung
Responses to Climate Change in California Chipmunks: Move, Adapt, or Die
10 Feb 2020 | Teaching Materials | Contributor(s):
By Talisin Hammond1, Rachel E. Walsh2, Eileen Lacey3
1. San Diego Zoo Institute for Conservation Research 2. University of California, Berkeley 3. Museum of Vertebrate Zoology, UC Berkeley
A series of three modules using data from natural history museum collections to examine responses to climate change in multiple chipmunk species. Elevation and morphological data, beginner skills...
Introduction to UNIX command line
22 Jan 2020 | Teaching Materials | Contributor(s):
By Serghei Mangul1, Kristen Butela2, Michael Sierk3, Lihua Stefan
1. University of California - Los Angeles 2. University of Pittsburgh 3. Saint Vincent College
A laboratory module for an upper-level undergraduate biology course in which students will be able to carry out simple tasks using the Unix command-line environment.
Following the Data - PowerPoint Addition to Module
10 Jan 2020 | Teaching Materials | Contributor(s):
By Darlene Panvini
This PowerPoint presentation guides instructors and students through the key background information for the module.
Data is the New Science - Modified and combined with Following the Data Module
In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...
BLAST Exercises for Analyzing Cloning Results
09 Jan 2020 | Teaching Materials | Contributor(s):
By Erin R. Morris
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. These activities have modified Lesson 1: Introduction to Genome...
Databases: A Study of Influenza
By Selene Nikaido
University of Central Missouri
This lesson introduces the student to the Influenza Research Database. Students will select Influenza genome sequences to see how they are related. Students tests hypotheses about evolutionary...
Introduction to Genome Annotation
This exercise is an adaptation of the Annotation Lesson by Rosenwald et al. It introduces the use of bioinformatics tools to extract information from genome databases. It is a basic lesson on...